كتب : وكالات
The former Ahli star informed Egyptian FA chairman Samir Zaher of his decision to resign after a meeting on Wednesday afternoon.
His resignation came just few weeks after the EFA said Younes had decided to snub his media work and carry out his duties as Egypt's U-20 team manager.
The EFA's regulations prohibit managers of national teams from working as TV presenters.
Younes helped Egypt qualify for the African Youth Championship after a 3-1 aggregate victory over Senegal.
The tournament will take place in Libya in March 2011.